“Resilient crops”
Development of resilient crops and production technologies
2025-08-08
Background
The frequent occurrence of extreme weather events due to global climate change, environmental degradation caused by rapid population growth, and crop production in marginal areas are destabilizing crop production and threatening global food and nutrition security. Global warming and rapid population growth are further aggravating the global-scale issues, making it difficult to respond to them with conventional breeding strategies. In anticipation of the increasing and accelerating impacts of climate change, it is highly desirable to accelerate the resolution of global-scale issues through new technologies that integrate synthetic bioengineering and big data.
Objectives
We will pave the way for the production of resilience-enhanced crops by developing the necessary technologies to create or produce resilient crops that are resistant to various external disturbances, such as poor environments, mainly targeting major crops such as rice and soybean, and the orphan crop quinoa.
Research Themes
- Development of technology for resilience enhancement production of high nutrient crops using genetic resources
- Development of basic technologies for resilience-enhanced crop design
- Development of breeding infrastructure utilizing untapped genetic and physiological mechanisms related to improved resource use efficiency
- Development of disease control technology with low environmental impact by utilizing disease resistance
Target Countries
Bolivia, Vietnam, China, Nepal, Indonesia, Philippines, Bangladesh, Brazil, Paraguay, Uruguay, Argentina
Target Beneficiaries
Researchers, producers and consumers of rice, soybean, quinoa and other crops, people in developing regions vulnerable to increased food supply insecurity
Project Leader
NAGATOSHI Yukari (Biological Resources and Post-harvest Division)
Related Pages
JIRCAS Report
Future Science Talent Academy – 27th Session: First-Year Students from Touougakkan Junior & Senior High School Learn About International Agricultural Research Through Llamas
On Thursday, March 19, 2026, twenty first-year students from Touougakkan Junior & Senior High School visited JIRCAS to take part in the 27th session of the "Future Science Talent Academy." The school is designated as a Super Science High School (SSH) by the Ministry of Education, Culture, Sports, Science and Technology (MEXT) and conducts experiential learning through the “Tsukuba Science Tour,” where students experience cutting-edge scientific research. Their visit to JIRCAS was part of this program, giving them an opportunity to learn about global agricultural research and the work of international scientists.
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On Thursday, October 9, 2025, 36 first-year students from the Top Advanced Course and Advanced Course Departments of Sakushin Gakuin High School visited the Japan International Research Center for Agricultural Sciences (JIRCAS) for the 13th session of the Future Science Talent Academy.
Future Science Talent Academy – 15th Session: Students from Gunma Prefectural Maebashi High School Experience Soybean Varieties and Rust Disease Observation
On Tuesday, October 28, 2025, nine students from Gunma Prefectural Maebashi High School visited the Japan International Research Center for Agricultural Sciences (JIRCAS) for the 15th session of the Future Science Talent Academy.
Press Release
Event, Symposium
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U Thant International Conference Hall + Online(United Nations University 3F, 5-53-70 Jingu-mae, Shibuya-ku, Tokyo 150-8925)
Field Information
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Pick Up
532. Changes in Virulence of Asian Soybean Rust Pathogen in Bangladesh
2022-05-10 Asian soybean rust is a serious problem in soybean production in tropical and subtropical regions. This disease is also a problem in Bangladesh along with the expansion of domestic production. In this study, we investigated the virulence of the Asian soybean rust against known resistance genes in order to control this disease through the introduction of resistant varieties. The results showed that while the virulence of the pathogenic samples in 2016 was weak and many of the known resistance genes were effective, the virulence of 2018 and 2019 samples changed strongly. They included a strongly virulent rust samples for which seven known resistance genes were completely ineffective. While the introduction of resistant varieties is effective from a cost and environmental impact perspective, the development of resistant varieties using gene-pyramiding to deal with highly virulent rusts is needed to achieve a stable effect of control.
Research Highlights
Article and Publication
2025
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Saito, Hiroki (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Nishimura, Kazusa (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Shirasawa, Kenta (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Yasui, Yasuo (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Adachi, Shunsuke (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Ueno, Mariko (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Kobayashi, Yasufumi (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Kushino, Sayako (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Katsura, Keisuke (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Takeuchi, Naoko (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Fujita, Yasunari (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Mizuno, Nobuyuki (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Kushino, Sayako , Mizuno, Nobuyuki , Shirasawa, Kenta , Kobayashi, Yasufumi , Fujita, Yasunari , Nishimura, Kazusa , Ueno, Mariko , Takeuchi, Naoko , Saito, Hiroki , Adachi, Shunsuke , Katsura, Keisuke , Hirakawa, Hideki , Yasui, Yasuo Hirakawa, Hideki (2025) Discovery of a novel CYP76AD1–DODA1 gene cluster associated with betalain pigmentation in quinoa. Cytologia, 90 :227-238. https://doi.org/10.1508/cytologia.90.227
90_D-25-000541.1 MB
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Murakami, Kazuya , Sato, Misao , Ikeda, Yu , Horii, Tatsuhiro , Nagatoshi, Yukari , Fujita, Miki , Fujie, Toshinori , Fujita, Yasunari , Shintake, Jun Nagatoshi, Yukari (2025) Plant Robotics for Sustainable and Environmentally Friendly Robots: Insights from Actuation Characteristics. Advanced Science, 2025 :e12896-. https://doi.org/10.1002/advs.202512896
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Murakami, Kazuya , Sato, Misao , Ikeda, Yu , Horii, Tatsuhiro , Nagatoshi, Yukari , Fujita, Miki , Fujie, Toshinori , Fujita, Yasunari , Shintake, Jun Sato, Misao (2025) Plant Robotics for Sustainable and Environmentally Friendly Robots: Insights from Actuation Characteristics. Advanced Science, 2025 :e12896-. https://doi.org/10.1002/advs.202512896
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Murakami, Kazuya , Sato, Misao , Ikeda, Yu , Horii, Tatsuhiro , Nagatoshi, Yukari , Fujita, Miki , Fujie, Toshinori , Fujita, Yasunari , Shintake, Jun Shintake, Jun (2025) Plant Robotics for Sustainable and Environmentally Friendly Robots: Insights from Actuation Characteristics. Advanced Science, 2025 :e12896-. https://doi.org/10.1002/advs.202512896
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Murakami, Kazuya , Sato, Misao , Ikeda, Yu , Horii, Tatsuhiro , Nagatoshi, Yukari , Fujita, Miki , Fujie, Toshinori , Fujita, Yasunari , Shintake, Jun Fujita, Miki (2025) Plant Robotics for Sustainable and Environmentally Friendly Robots: Insights from Actuation Characteristics. Advanced Science, 2025 :e12896-. https://doi.org/10.1002/advs.202512896
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Murakami, Kazuya , Sato, Misao , Ikeda, Yu , Horii, Tatsuhiro , Nagatoshi, Yukari , Fujita, Miki , Fujie, Toshinori , Fujita, Yasunari , Shintake, Jun Ikeda, Yu (2025) Plant Robotics for Sustainable and Environmentally Friendly Robots: Insights from Actuation Characteristics. Advanced Science, 2025 :e12896-. https://doi.org/10.1002/advs.202512896
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Murakami, Kazuya , Sato, Misao , Ikeda, Yu , Horii, Tatsuhiro , Nagatoshi, Yukari , Fujita, Miki , Fujie, Toshinori , Fujita, Yasunari , Shintake, Jun Fujie, Toshinori (2025) Plant Robotics for Sustainable and Environmentally Friendly Robots: Insights from Actuation Characteristics. Advanced Science, 2025 :e12896-. https://doi.org/10.1002/advs.202512896
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Murakami, Kazuya , Sato, Misao , Ikeda, Yu , Horii, Tatsuhiro , Nagatoshi, Yukari , Fujita, Miki , Fujie, Toshinori , Fujita, Yasunari , Shintake, Jun Horii, Tatsuhiro (2025) Plant Robotics for Sustainable and Environmentally Friendly Robots: Insights from Actuation Characteristics. Advanced Science, 2025 :e12896-. https://doi.org/10.1002/advs.202512896
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Murakami, Kazuya , Sato, Misao , Ikeda, Yu , Horii, Tatsuhiro , Nagatoshi, Yukari , Fujita, Miki , Fujie, Toshinori , Fujita, Yasunari , Shintake, Jun Murakami, Kazuya (2025) Plant Robotics for Sustainable and Environmentally Friendly Robots: Insights from Actuation Characteristics. Advanced Science, 2025 :e12896-. https://doi.org/10.1002/advs.202512896
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Murakami, Kazuya , Sato, Misao , Ikeda, Yu , Horii, Tatsuhiro , Nagatoshi, Yukari , Fujita, Miki , Fujie, Toshinori , Fujita, Yasunari , Shintake, Jun Fujita, Yasunari (2025) Plant Robotics for Sustainable and Environmentally Friendly Robots: Insights from Actuation Characteristics. Advanced Science, 2025 :e12896-. https://doi.org/10.1002/advs.202512896
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Hossain, Md. Motaher , Sultana, Farjana , Mostafa, Mahabuba , Adhikary, Shanta , Yamanaka, Naoki Mostafa, Mahabuba (2025) Advancing soybean rust resistance: Strategies, mechanisms, and innovations in gene pyramiding. Physiological and Molecular Plant Pathology, 139 :102770-. https://doi.org/10.34556/0002001153
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Hossain, Md. Motaher , Sultana, Farjana , Mostafa, Mahabuba , Adhikary, Shanta , Yamanaka, Naoki Adhikary, Shanta (2025) Advancing soybean rust resistance: Strategies, mechanisms, and innovations in gene pyramiding. Physiological and Molecular Plant Pathology, 139 :102770-. https://doi.org/10.34556/0002001153
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Hossain, Md. Motaher , Sultana, Farjana , Mostafa, Mahabuba , Adhikary, Shanta , Yamanaka, Naoki Hossain, Md. Motaher (2025) Advancing soybean rust resistance: Strategies, mechanisms, and innovations in gene pyramiding. Physiological and Molecular Plant Pathology, 139 :102770-. https://doi.org/10.34556/0002001153
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Hossain, Md. Motaher , Sultana, Farjana , Mostafa, Mahabuba , Adhikary, Shanta , Yamanaka, Naoki Yamanaka, Naoki (2025) Advancing soybean rust resistance: Strategies, mechanisms, and innovations in gene pyramiding. Physiological and Molecular Plant Pathology, 139 :102770-. https://doi.org/10.34556/0002001153
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Hossain, Md. Motaher , Sultana, Farjana , Mostafa, Mahabuba , Adhikary, Shanta , Yamanaka, Naoki Sultana, Farjana (2025) Advancing soybean rust resistance: Strategies, mechanisms, and innovations in gene pyramiding. Physiological and Molecular Plant Pathology, 139 :102770-. https://doi.org/10.34556/0002001153
2023
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Yamanaka, Naoki , Kato, Masayasu , Akamatsu, Hajime , Yamaoka, Yuichi Yamaoka, Yuichi (2023) Manual de laboratorio para estudios sobre la resistencia a roya de la soja. , :1-55. https://doi.org/10.34556/0002000881
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Yamanaka, Naoki , Kato, Masayasu , Akamatsu, Hajime , Yamaoka, Yuichi Yamanaka, Naoki (2023) Manual de laboratorio para estudios sobre la resistencia a roya de la soja. , :1-55. https://doi.org/10.34556/0002000881
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Yamanaka, Naoki , Kato, Masayasu , Akamatsu, Hajime , Yamaoka, Yuichi Kato, Masayasu (2023) Manual de laboratorio para estudios sobre la resistencia a roya de la soja. , :1-55. https://doi.org/10.34556/0002000881
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Yamanaka, Naoki , Kato, Masayasu , Akamatsu, Hajime , Yamaoka, Yuichi Akamatsu, Hajime (2023) Manual de laboratorio para estudios sobre la resistencia a roya de la soja. , :1-55. https://doi.org/10.34556/0002000881
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Yamanaka, Naoki , Kato, Masayasu , Akamatsu, Hajime , Yamaoka, Yuichi Akamatsu, Hajime (2023) Laboratory manual for studies on soybean rust resistance. , :1-55. https://doi.org/10.34556/0002000882
Laboratory_manual_v.27.13.6 MB
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Yamanaka, Naoki , Kato, Masayasu , Akamatsu, Hajime , Yamaoka, Yuichi Yamaoka, Yuichi (2023) Laboratory manual for studies on soybean rust resistance. , :1-55. https://doi.org/10.34556/0002000882
Laboratory_manual_v.27.13.6 MB
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Yamanaka, Naoki , Kato, Masayasu , Akamatsu, Hajime , Yamaoka, Yuichi Yamanaka, Naoki (2023) Laboratory manual for studies on soybean rust resistance. , :1-55. https://doi.org/10.34556/0002000882
Laboratory_manual_v.27.13.6 MB
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Yamanaka, Naoki , Kato, Masayasu , Akamatsu, Hajime , Yamaoka, Yuichi Kato, Masayasu (2023) Laboratory manual for studies on soybean rust resistance. , :1-55. https://doi.org/10.34556/0002000882
Laboratory_manual_v.27.13.6 MB
2021
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Asai, Hidetoshi , Saito, Kazuki , Kawamura, Kensuke Kawamura, Kensuke (2021) Application of a Bayesian approach to quantify the impact of nitrogen fertilizer on upland rice yield in sub-Saharan Africa. Field Crops Research, 272 :108284-. https://doi.org/10.34556/0002001114
FCR272_108284_2021_AM1.0 MB
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Asai, Hidetoshi , Saito, Kazuki , Kawamura, Kensuke Asai, Hidetoshi (2021) Application of a Bayesian approach to quantify the impact of nitrogen fertilizer on upland rice yield in sub-Saharan Africa. Field Crops Research, 272 :108284-. https://doi.org/10.34556/0002001114
FCR272_108284_2021_AM1.0 MB
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Asai, Hidetoshi , Saito, Kazuki , Kawamura, Kensuke Saito, Kazuki (2021) Application of a Bayesian approach to quantify the impact of nitrogen fertilizer on upland rice yield in sub-Saharan Africa. Field Crops Research, 272 :108284-. https://doi.org/10.34556/0002001114
FCR272_108284_2021_AM1.0 MB


