General Utilities for Genotyping Study (GUGS): A Comprehensive Application in Genotype and Sequence Data Manipulation

JARQ : Japan Agricultural Research Quarterly
ISSN 00213551
書誌レコードID(総合目録DB) AA0068709X
General Utilities for Genotyping Study (GUGS) is a toolbox for aiding the analysis of DNA marker data and its design in Microsoft Excel (MS Excel). GUGS provides more than 100 flexible functions for the manipulation, evaluation, and conversion of genotype data. It also provides functionalities for genotype format conversion to support linkage analysis using JoinMap software, frequency analysis for population genetics, parentage analysis, and statistical genetic analysis. Its functionality for the manipulation of nucleotide or amino acid sequences also assists DNA maker design These GUGS features enable users to conduct all steps from DNA marker design to preliminary evaluation, data analysis, and format conversion for advanced study in a single environment without having to export/import data. GUGS is freely available at https://github.com/tokurou/GUGS under the GPL v3 license.
刊行年月日
作成者 Tokurou SHIMIZU
著者キーワード bioinformatics breeding DNA marker genetics linkage analysis
公開者 Japan International Research Center for Agricultural Sciences
受付日 2020-08-28
受理日 2020-12-07
55
4
言語 eng
備考 In Press